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Achieving reliability and high accuracy in automated protein docking: ClusPro, PIPER, SDU, and stability analysis in CAPRI rounds 13-19

Our approach to protein-protein docking includes three main steps. First we run PIPER, a rigid body docking program based on the Fast Fourier Transform (FFT) correlation approach, extended to use pairwise interactions potentials. Next, the 1000 best energy conformations are clustered, and the 30 lar...

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Bibliografiska uppgifter
Huvudupphovsmän: Kozakov, Dima, Hall, David R., Beglov, Dmitri, Brenke, Ryan, Comeau, Stephen R., Shen, Yang, Li, Keyong, Zheng, Jiefu, Vakili, Pirooz, Paschalidis, Ioannis Ch., Vajda, Sandor
Materialtyp: Artigo
Språk:Inglês
Publicerad: 2010
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Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC3027207/
https://ncbi.nlm.nih.gov/pubmed/20818657
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/prot.22835
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