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GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments

Summary: Accurate prediction of transcription factor binding motifs that are enriched in a collection of sequences remains a computational challenge. Here we report on GimmeMotifs, a pipeline that incorporates an ensemble of computational tools to predict motifs de novo from ChIP-sequencing (ChIP-se...

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Detalhes bibliográficos
Main Authors: van Heeringen, Simon J., Veenstra, Gert Jan C.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3018809/
https://ncbi.nlm.nih.gov/pubmed/21081511
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btq636
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