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Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
BACKGROUND: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly problem fall into two broad categories - based on the data structures which they employ. The first class uses an overlap/strin...
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| Main Authors: | , , , , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado: |
BioMed Central
2010
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| Assuntos: | |
| Acceso en liña: | https://ncbi.nlm.nih.gov/pmc/articles/PMC2996408/ https://ncbi.nlm.nih.gov/pubmed/21078174 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-11-560 |
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