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CHARMM force field parameters for simulation of reactive intermediates in native and thio-substituted ribozymes

Force field parameters specifically optimized for residues important in the study of RNA catalysis are derived from density-functional calculations in a fashion consistent with the CHARMM27 all-atom empirical force field. Parameters are presented for residues that model reactive RNA intermediates an...

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Detalhes bibliográficos
Main Authors: Mayaan, Evelyn, Moser, Adam, MacKerell, Alexander D., York, Darrin M.
Formato: Artigo
Idioma:Inglês
Publicado em: 2007
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2869295/
https://ncbi.nlm.nih.gov/pubmed/17186477
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/jcc.20474
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