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An exact accelerated stochastic simulation algorithm

An exact method for stochastic simulation of chemical reaction networks, which accelerates the stochastic simulation algorithm (SSA), is proposed. The present “ER-leap” algorithm is derived from analytic upper and lower bounds on the multireaction probabilities sampled by SSA, together with rejectio...

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Bibliografiske detaljer
Main Authors: Mjolsness, Eric, Orendorff, David, Chatelain, Philippe, Koumoutsakos, Petros
Format: Artigo
Sprog:Inglês
Udgivet: American Institute of Physics 2009
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2852436/
https://ncbi.nlm.nih.gov/pubmed/19368432
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.3078490
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