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Exact distribution of a pattern in a set of random sequences generated by a Markov source: applications to biological data

BACKGROUND: In bioinformatics it is common to search for a pattern of interest in a potentially large set of rather short sequences (upstream gene regions, proteins, exons, etc.). Although many methodological approaches allow practitioners to compute the distribution of a pattern count in a random s...

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Библиографические подробности
Главные авторы: Nuel, Gregory, Regad, Leslie, Martin, Juliette, Camproux, Anne-Claude
Формат: Artigo
Язык:Inglês
Опубликовано: BioMed Central 2010
Предметы:
Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC2828453/
https://ncbi.nlm.nih.gov/pubmed/20205909
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1748-7188-5-15
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