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Efficient alignment-free DNA barcode analytics

BACKGROUND: In this work we consider barcode DNA analysis problems and address them using alternative, alignment-free methods and representations which model sequences as collections of short sequence fragments (features). The methods use fixed-length representations (spectrum) for barcode sequences...

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Detalhes bibliográficos
Main Authors: Kuksa, Pavel, Pavlovic, Vladimir
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2009
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2775155/
https://ncbi.nlm.nih.gov/pubmed/19900305
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S14-S9
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