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Exhaustive Search for Over-represented DNA Sequence Motifs with CisFinder
We present CisFinder software, which generates a comprehensive list of motifs enriched in a set of DNA sequences and describes them with position frequency matrices (PFMs). A new algorithm was designed to estimate PFMs directly from counts of n-mer words with and without gaps; then PFMs are extended...
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| 主要な著者: | , |
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| フォーマット: | Artigo |
| 言語: | Inglês |
| 出版事項: |
Oxford University Press
2009
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| 主題: | |
| オンライン･アクセス: | https://ncbi.nlm.nih.gov/pmc/articles/PMC2762409/ https://ncbi.nlm.nih.gov/pubmed/19740934 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/dnares/dsp014 |
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