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PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds

Motivation: The explosion of next-generation sequencing data has spawned the design of new algorithms and software tools to provide efficient mapping for different read lengths and sequencing technologies. In particular, ABI's sequencer (SOLiD system) poses a big computational challenge with it...

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Detalles Bibliográficos
Main Authors: Chen, Yangho, Souaiaia, Tade, Chen, Ting
Formato: Artigo
Idioma:Inglês
Publicado: Oxford University Press 2009
Assuntos:
Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC2752623/
https://ncbi.nlm.nih.gov/pubmed/19675096
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btp486
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