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Small molecule hydration free energies in explicit solvent: An extensive test of fixed-charge atomistic simulations

Using molecular dynamics free energy simulations with TIP3P explicit solvent, we compute the hydration free energies of 504 neutral small organic molecules and compare them to experiments. We find, first, good general agreement between the simulations and the experiments, with an RMS error of 1.24 k...

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Détails bibliographiques
Auteurs principaux: Mobley, David L., Bayly, Christopher I., Cooper, Matthew D., Shirts, Michael R., Dill, Ken A.
Format: Artigo
Langue:Inglês
Publié: 2009
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC2701304/
https://ncbi.nlm.nih.gov/pubmed/20150953
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct800409d
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