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A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes

BACKGROUND: The challenges of accurate gene prediction and enumeration are further aggravated in large genomes that contain highly repetitive transposable elements (TEs). Yet TEs play a substantial role in genome evolution and are themselves an important subject of study. Repeat annotation, based on...

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Detalhes bibliográficos
Main Authors: Kurtz, Stefan, Narechania, Apurva, Stein, Joshua C, Ware, Doreen
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2613927/
https://ncbi.nlm.nih.gov/pubmed/18976482
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-9-517
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