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Single Pass Streaming BLAST on FPGAs
Approximate string matching is fundamental to bioinformatics and has been the subject of numerous FPGA acceleration studies. We address issues with respect to FPGA implementations of both BLAST- and dynamic-programming- (DP) based methods. Our primary contribution is a new algorithm for emulating th...
Tallennettuna:
| Päätekijät: | , , , , |
|---|---|
| Aineistotyyppi: | Artigo |
| Kieli: | Inglês |
| Julkaistu: |
2007
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| Aiheet: | |
| Linkit: | https://ncbi.nlm.nih.gov/pmc/articles/PMC2598392/ https://ncbi.nlm.nih.gov/pubmed/19081828 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.parco.2007.09.003 |
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