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Automated motif extraction and classification in RNA tertiary structures

We used a novel graph-based approach to extract RNA tertiary motifs. We cataloged them all and clustered them using an innovative graph similarity measure. We applied our method to three widely studied structures: Haloarcula marismortui 50S (H.m 50S), Escherichia coli 50S (E. coli 50S), and Thermus...

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Detalhes bibliográficos
Main Authors: Djelloul, Mahassine, Denise, Alain
Formato: Artigo
Idioma:Inglês
Publicado em: Cold Spring Harbor Laboratory Press 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2590963/
https://ncbi.nlm.nih.gov/pubmed/18957493
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.1061108
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