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A Two-Stage Pruning Algorithm for Likelihood Computation for a Population Tree

We have developed a pruning algorithm for likelihood estimation of a tree of populations. This algorithm enables us to compute the likelihood for large trees. Thus, it gives an efficient way of obtaining the maximum-likelihood estimate (MLE) for a given tree topology. Our method utilizes the differe...

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Detalhes bibliográficos
Main Authors: RoyChoudhury, Arindam, Felsenstein, Joseph, Thompson, Elizabeth A.
Formato: Artigo
Idioma:Inglês
Publicado em: Genetics Society of America 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2567359/
https://ncbi.nlm.nih.gov/pubmed/18780754
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1534/genetics.107.085753
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