Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms

BACKGROUND: For typing of Staphylococcus aureus, DNA sequencing of the repeat region of the protein A (spa) gene is a well established discriminatory method for outbreak investigations. Recently, it was hypothesized that this region also reflects long-term epidemiology. However, no automated and obj...

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Main Authors: Mellmann, Alexander, Weniger, Thomas, Berssenbrügge, Christoph, Rothgänger, Jörg, Sammeth, Michael, Stoye, Jens, Harmsen, Dag
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2007
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Research Article
Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC2148047/
https://ncbi.nlm.nih.gov/pubmed/17967176
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2180-7-98
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