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SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences

BACKGROUND: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limited to short ones or impose some constraints on the pattern type. Many patterns for binding sites in prokaryotic species ar...

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Bibliographische Detailangaben
Hauptverfasser: Elloumi, Fathi, Nason, Martha
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2007
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2082047/
https://ncbi.nlm.nih.gov/pubmed/17883842
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-8-354
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