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pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows

RNA pseudoknots are an important structural feature of RNAs, but often neglected in computer predictions for reasons of efficiency. Here, we present the pknotsRG Web Server for single sequence RNA secondary structure prediction including pseudoknots. pknotsRG employs the newest Turner energy rules f...

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Bibliografiske detaljer
Main Authors: Reeder, Jens, Steffen, Peter, Giegerich, Robert
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2007
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1933184/
https://ncbi.nlm.nih.gov/pubmed/17478505
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkm258
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