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eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape

We have developed a method to predict ligand-binding sites in a new protein structure by searching for similar binding sites in the Protein Data Bank (PDB). The similarities are measured according to the shapes of the molecular surfaces and their electrostatic potentials. A new web server, eF-seek,...

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Bibliografiske detaljer
Main Authors: Kinoshita, Kengo, Murakami, Yoichi, Nakamura, Haruki
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2007
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1933152/
https://ncbi.nlm.nih.gov/pubmed/17567616
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkm351
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