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SMOTIF: efficient structured pattern and profile motif search

BACKGROUND: A structured motif allows variable length gaps between several components, where each component is a simple motif, which allows either no gaps or only fixed length gaps. The motif can either be represented as a pattern or a profile (also called positional weight matrix). We propose an ef...

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Bibliografiske detaljer
Main Authors: Zhang, Yongqiang, Zaki, Mohammed J
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2006
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1679804/
https://ncbi.nlm.nih.gov/pubmed/17118189
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1748-7188-1-22
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