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The application of cluster analysis in the intercomparison of loop structures in RNA

We have developed a computational approach for the comparison and classification of RNA loop structures. Hairpin or interior loops identified in atomic resolution RNA structures were intercompared by conformational matching. The root-mean-square deviation (RMSD) values between all pairs of RNA fragm...

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Autors principals: HUANG, HUNG-CHUNG, NAGASWAMY, UMA, FOX, GEORGE E.
Format: Artigo
Idioma:Inglês
Publicat: Copyright 2005 by RNA Society 2005
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC1370731/
https://ncbi.nlm.nih.gov/pubmed/15769871
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.7104605
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