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Measuring similarities between transcription factor binding sites

BACKGROUND: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profiles complicate large scale analysis of transcription factor binding sites. RESULTS: We propose to identify and group simi...

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Main Authors: Kielbasa, Szymon M, Gonze, Didier, Herzel, Hanspeter
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2005
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC1261160/
https://ncbi.nlm.nih.gov/pubmed/16191190
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-6-237
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