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Replica exchange with solute tempering: A method for sampling biological systems in explicit water

An innovative replica exchange (parallel tempering) method called replica exchange with solute tempering (REST) for the efficient sampling of aqueous protein solutions is presented here. The method bypasses the poor scaling with system size of standard replica exchange and thus reduces the number of...

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Main Authors: Liu, Pu, Kim, Byungchan, Friesner, Richard A., Berne, B. J.
格式: Artigo
語言:Inglês
出版: National Academy of Sciences 2005
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC1236566/
https://ncbi.nlm.nih.gov/pubmed/16172406
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.0506346102
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