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Species classifier choice is a key consideration when analysing low-complexity food microbiome data

Abstract Background The use of shotgun metagenomics to analyse low-complexity microbial communities in foods has the potential to be of considerable fundamental and applied value. However, there is currently no consensus with respect to choice of species classification tool, platform, or sequencing...

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Main Authors: Aaron M. Walsh, Fiona Crispie, Orla O’Sullivan, Laura Finnegan, Marcus J. Claesson, Paul D. Cotter
Format: Artigo
Jezik:Inglês
Izdano: BMC 2018-03-01
Serija:Microbiome
Teme:
Online dostop:http://link.springer.com/article/10.1186/s40168-018-0437-0
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