Methods for sequencing the pandemic: benefits of rapid or high-throughput processing [version 2; peer review: 2 approved]

Genomic epidemiology has proven successful for real-time and retrospective monitoring of small and large-scale outbreaks. Here, we report two genomic sequencing and analysis strategies for rapid-turnaround or high-throughput processing of metagenomic samples. The rapid-turnaround method was designed...

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Detalhes bibliográficos
Main Authors: Krystal Sheridan, Jolene R. Bowers, Brendan Larsen, W. Tanner Porter, David M. Engelthaler, Ashlyn Pfeiffer, Darrin Lemmer, Danielle Vasquez, Megan L. Folkerts, Amber Jones, Marjorie Nguyen, Chris French
Formato: Artigo
Idioma:Inglês
Publicado em: F1000 Research Ltd 2022-02-01
Colecção:F1000Research
Assuntos:
Genomic epidemiology
SARS-CoV2
targeted genomics
sequencing methods
phylogenetics
eng
Acesso em linha:https://f1000research.com/articles/10-48/v2
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