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3DCoop: An approach for computational inference of cell-type-specific transcriptional regulators cooperation in 3D chromatin

Summary: Precise identification of context-specific transcriptional regulators (TRs) cooperation facilitates the understanding of complex gene regulation. However, previous methods are highly reliant on the availability of ChIPped TRs. Here, we provide a protocol for running 3DCoop, a pipeline for c...

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Main Authors: Xianfu Yi, Menghan Luo, Xiangling Feng, Yao Zhou, Jianhua Wang, Mulin Jun Li
格式: Artigo
語言:Inglês
出版: Elsevier 2022-06-01
叢編:STAR Protocols
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在線閱讀:http://www.sciencedirect.com/science/article/pii/S2666166722002623
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