A Nuclear Ribosomal DNA Phylogeny of Acer Inferred with Maximum Likelihood, Splits Graphs, and Motif Analysis of 606 Sequences

The multi-copy internal transcribed spacer (ITS) region of nuclear ribosomal DNA is widely used to infer phylogenetic relationships among closely related taxa. Here we use maximum likelihood (ML) and splits graph analyses to extract phylogenetic information from ~ 600 mostly cloned ITS sequences, re...

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Hlavní autoři: Guido W. Grimm, Susanne S. Renner, Alexandros Stamatakis, Vera Hemleben
Médium: Artigo
Jazyk:Inglês
Vydáno: SAGE Publishing 2006-01-01
Edice:Evolutionary Bioinformatics
Témata:
Bipartition networks
large-scale maximum likelihood analyses
neighbor-nets
RAxML
ribosomal DNA
ITS sequence motifs
On-line přístup:http://la-press.com/article.php?article_id=132
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