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Fast-bonito: A faster deep learning based basecaller for nanopore sequencing

Nanopore sequencing from Oxford Nanopore Technologies (ONT) is a promising third-generation sequencing (TGS) technology that generates relatively longer sequencing reads compared to the next-generation sequencing (NGS) technology. A basecaller is a piece of software that translates the original elec...

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Principais autores: Zhimeng Xu, Yuting Mai, Denghui Liu, Wenjun He, Xinyuan Lin, Chi Xu, Lei Zhang, Xin Meng, Joseph Mafofo, Walid Abbas Zaher, Ashish Koshy, Yi Li, Nan Qiao
Formato: Artigo
Idioma:Inglês
Publicado em: Elsevier 2021-12-01
coleção:Artificial Intelligence in the Life Sciences
Assuntos:
Bonito
Fast-Bonito
Base calling
Nanopore
Ascend chip
Deep neural network
Acesso em linha:http://www.sciencedirect.com/science/article/pii/S2667318521000118
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