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parafac4microbiome: exploratory analysis of longitudinal microbiome data using parallel factor analysis

ABSTRACT Studies investigating microbial temporal dynamics are increasingly common, leveraging longitudinal designs that collect microbial abundance data across multiple time points from the same subjects. Traditional exploratory approaches like principal component analysis fail to fully utilize thi...

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Principais autores: G. R. van der Ploeg, J. A. Westerhuis, A. Heintz-Buschart, A. K. Smilde
Format: Artigo
Sprog:Inglês
Udgivet: American Society for Microbiology 2025-06-01
Serier:mSystems
Fag:
multi-way
PARAFAC
tensor factorization
decomposition
dynamics
Online adgang:https://journals.asm.org/doi/10.1128/msystems.00472-25
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