SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines

Abstract Background The evolution of next-generation sequencing (NGS) technologies has led to increased focus on RNA-Seq. Many bioinformatic tools have been developed for RNA-Seq analysis, each with unique performance characteristics and configuration parameters. Users face an increasingly complex t...

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Detalhes bibliográficos

Principais autores:	Jérôme Audoux, Mikaël Salson, Christophe F. Grosset, Sacha Beaumeunier, Jean-Marc Holder, Thérèse Commes, Nicolas Philippe
Formato:	Artigo
Idioma:	Inglês
Publicado em:	BMC 2017-09-01
coleção:	BMC Bioinformatics
Assuntos:	RNA-Seq Transcriptomics Benchmark Pipeline optimization
Acesso em linha:	http://link.springer.com/article/10.1186/s12859-017-1831-5
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