NucBreak: location of structural errors in a genome assembly by using paired-end Illumina reads

Abstract Background Advances in whole genome sequencing strategies have provided the opportunity for genomic and comparative genomic analysis of a vast variety of organisms. The analysis results are highly dependent on the quality of the genome assemblies used. Assessment of the assembly accuracy ma...

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Bibliografiska uppgifter

Huvudupphov:	Ksenia Khelik, Geir Kjetil Sandve, Alexander Johan Nederbragt, Torbjørn Rognes
Materialtyp:	Artigo
Språk:	Inglês
Utgiven:	BMC 2020-02-01
Serie:	BMC Bioinformatics
Ämnen:	Genome assembly Assembly errors Illumina paired-end reads Assembly accuracy assessment Structural variant detection
Länkar:	http://link.springer.com/article/10.1186/s12859-020-3414-0
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