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Function inference of million-scale microbiomes using multi-GPU acceleration

ABSTRACT Amplicon sequencing enables taxonomic profiling of microbial communities but offers limited insight into their functional potential. Existing tools such as Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt2) infer functions through phylogenetic placem...

Ausführliche Beschreibung

Gespeichert in:
Hauptverfasser: Yu Zhang, Minan Wang, Yangyang Sun, Hao Gao, Xiaoquan Su
Format: Artigo
Sprache:Inglês
Veröffentlicht: American Society for Microbiology 2025-12-01
Schriftenreihe:Microbiology Spectrum
Schlagworte:
microbiome
function inference
GPU
parallel computing
Online-Zugang:https://journals.asm.org/doi/10.1128/spectrum.02072-25
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