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Snaq: A Dynamic Snakemake Pipeline for Microbiome Data Analysis With QIIME2

Optimizing and automating a protocol for 16S microbiome data analysis with QIIME2 is a challenging task. It involves a multi-step process, and multiple parameters and options that need to be tested and determined. In this article, we describe Snaq, a snakemake pipeline that helps automate and optimi...

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Principais autores: Attayeb Mohsen, Yi-An Chen, Rodolfo S. Allendes Osorio, Chihiro Higuchi, Kenji Mizuguchi
格式: Artigo
語言:Inglês
出版: Frontiers Media S.A. 2022-07-01
叢編:Frontiers in Bioinformatics
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在線閱讀:https://www.frontiersin.org/articles/10.3389/fbinf.2022.893933/full
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