Phylogeny- and Abundance-Based Metrics Allow for the Consistent Comparison of Core Gut Microbiome Diversity Indices Across Host Species

The filtering of gut microbial datasets to retain high prevalence taxa is often performed to identify a common core gut microbiome that may be important for host biological functions. However, prevalence thresholds used to identify a common core are highly variable, and it remains unclear how they a...

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Detalhes bibliográficos

Principais autores:	Alice Risely, Mark A. F. Gillingham, Arnaud Béchet, Stefan Brändel, Alexander C. Heni, Marco Heurich, Sebastian Menke, Marta B. Manser, Marco Tschapka, Wasimuddin, Simone Sommer
Formato:	Artigo
Idioma:	Inglês
Publicado em:	Frontiers Media S.A. 2021-05-01
coleção:	Frontiers in Microbiology
Assuntos:	host-microbe communities gut microbiota core microbiome community ecology methods bioinformatics
Acesso em linha:	https://www.frontiersin.org/articles/10.3389/fmicb.2021.659918/full
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