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BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation

Abstract Background RNA sequencing has become an increasingly affordable way to profile gene expression patterns. Here we introduce a workflow implementing several open-source softwares that can be run on a high performance computing environment. Results Developed as a tool by the Bioinformatics Sha...

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Hauptverfasser: Venkat Sundar Gadepalli, Hatice Gulcin Ozer, Ayse Selen Yilmaz, Maciej Pietrzak, Amy Webb
Format: Artigo
Sprache:Inglês
Veröffentlicht: BMC 2019-12-01
Schriftenreihe:BMC Bioinformatics
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Online-Zugang:https://doi.org/10.1186/s12859-019-3251-1
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