Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches

The aims of this study were i) to evaluate the possibility to detect and possibly quantify microorganisms belonging to different domains experimentally spiked in smoked salmon at known concentrations using shotgun metagenomics; ii) to compare the sequencing results using four bioinformatic tools. Th...

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Bibliografiska uppgifter

Huvudupphov:	Alessandra De Cesare, Chiara Oliveri, Alex Lucchi, Frederique Pasquali, Gerardo Manfreda
Materialtyp:	Artigo
Språk:	Inglês
Utgiven:	PAGEPress Publications 2019-12-01
Serie:	Italian Journal of Food Safety
Ämnen:	Shotgun metagenomics, smoked salmon, microbiological hazards, bioinformatic tools
Länkar:	https://www.pagepressjournals.org/index.php/ijfs/article/view/8462
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