Developing JSequitur to Study the Hierarchical Structure of Biological Sequences in a Grammatical Inference Framework of String Compression Algorithms

Grammatical inference methods are expected to find grammatical structures hidden in biological sequences. One hopes that studies of grammar serve as an appropriate tool for theory formation. Thus, we have developed JSequitur for automatically generating the grammatical structure of biological sequen...

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Autors principals:	Bulgan Galbadrakh, Kyung-Eun Lee, Hyun-Seok Park
Format:	Artigo
Idioma:	Inglês
Publicat:	BioMed Central 2012-12-01
Col·lecció:	Genomics & Informatics
Matèries:	context-free grammar formal language theory natural language processing stochastic modeling
Accés en línia:	http://genominfo.org/upload/pdf/gni-10-266.pdf
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