CacPred: a cascaded convolutional neural network for TF-DNA binding prediction

Abstract Background Transcription factors (TFs) regulate the genes’ expression by binding to DNA sequences. Aligned TFBSs of the same TF are seen as cis-regulatory motifs, and substantial computational efforts have been invested to find motifs. In recent years, convolutional neural networks (CNNs) h...

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Principais autores:	Shuangquan Zhang, Anjun Ma, Xuping Xie, Zhichao Lian, Yan Wang
格式:	Artigo
語言:	Inglês
出版:	BMC 2025-03-01
叢編:	BMC Genomics
主題:	Transcription factor ChIP-seq Deep learning TF-DNA binding prediction
在線閱讀:	https://doi.org/10.1186/s12864-025-11399-y
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