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GRASP2: fast and memory-efficient gene-centric assembly and homolog search for metagenomic sequencing data

Abstract Background A crucial task in metagenomic analysis is to annotate the function and taxonomy of the sequencing reads generated from a microbiome sample. In general, the reads can either be assembled into contigs and searched against reference databases, or individually searched without assemb...

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Auteurs principaux: Cuncong Zhong, Youngik Yang, Shibu Yooseph
Format: Artigo
Langue:Inglês
Publié: BMC 2019-06-01
Collection:BMC Bioinformatics
Accès en ligne:http://link.springer.com/article/10.1186/s12859-019-2818-1
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