A machine learning-based service for estimating quality of genomes using PATRIC

Abstract Background Recent advances in high-volume sequencing technology and mining of genomes from metagenomic samples call for rapid and reliable genome quality evaluation. The current release of the PATRIC database contains over 220,000 genomes, and current metagenomic technology supports assembl...

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Autores principales:	Bruce Parrello, Rory Butler, Philippe Chlenski, Robert Olson, Jamie Overbeek, Gordon D. Pusch, Veronika Vonstein, Ross Overbeek
Formato:	Artigo
Lenguaje:	Inglês
Publicado:	BMC 2019-10-01
Colección:	BMC Bioinformatics
Materias:	CheckM RAST Genome annotation Random forest Machine learning Metagenomics
Acceso en línea:	http://link.springer.com/article/10.1186/s12859-019-3068-y
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