PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Abstract Background Detection of exotic plant pathogens and preventing their entry and establishment are critical for the protection of agricultural systems while securing the global trading of agricultural commodities. High-throughput sequencing (HTS) has been applied successfully for plant pathoge...

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Hlavní autoři:	Xiaojun Hu, Oscar P. Hurtado-Gonzales, Bishwo N. Adhikari, Ronald D. French-Monar, Martha Malapi, Joseph A. Foster, Clint D. McFarland
Médium:	Artigo
Jazyk:	Inglês
Vydáno:	BMC 2023-12-01
Edice:	BMC Bioinformatics
Témata:	Phytopathogen Pipeline Phytosanitary Quarantine Pathogen detection Bioinformatics
On-line přístup:	https://doi.org/10.1186/s12859-023-05589-2
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