Comparative Analysis of Next- and Third-Generation Sequencing Platforms for Chikungunya Virus Whole-Genome Sequencing Using a Lineage-Inclusive Primer Set During the 2025 Foshan Outbreak

Chikungunya virus (CHIKV) poses an increasing global public health threat, as evidenced by the significant 2025 Foshan outbreak in China. Rapid, whole-genome sequencing (WGS) is critical for outbreak response but is challenged by primer mismatches across diverse lineages and a lack of direct sequenc...

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Päätekijät:	Penghui Jia, Xiao Cong, Chang Zhang, Zhe Liu, Xiaofang Peng, Juan Su, Qiqi Tan, Shen Huang, Changyun Sun, Xin Zhang, Baisheng Li
Aineistotyyppi:	Artigo
Kieli:	Inglês
Julkaistu:	MDPI AG 2026-02-01
Sarja:	Tropical Medicine and Infectious Disease
Aiheet:	chikungunya virus whole-genome sequencing genomic surveillance outbreak investigation lineage-inclusive primer set phylogenetics
Linkit:	https://www.mdpi.com/2414-6366/11/2/44
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