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bootGSEA: a bootstrap and rank aggregation pipeline for multi-study and multi-omics enrichment analyses

Introduction: Gene set enrichment analysis (GSEA) subsequent to differential expression analysis is a standard step in transcriptomics and proteomics data analysis. Although many tools for this step are available, the results are often difficult to reproduce because set annotations can change in the...

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Principais autores: Shamini Hemandhar Kumar, Ines Tapken, Daniela Kuhn, Peter Claus, Klaus Jung
Formato: Artigo
Idioma:Inglês
Publicado em: Frontiers Media S.A. 2024-04-01
coleção:Frontiers in Bioinformatics
Assuntos:
bootstrap analysis
gene set enrichment analysis
multi-omics analysis
proteomics
rank aggregation
transcriptomics
Acesso em linha:https://www.frontiersin.org/articles/10.3389/fbinf.2024.1380928/full
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