An in-depth evaluation of metagenomic classifiers for soil microbiomes

Abstract Background Recent endeavours in metagenomics, exemplified by projects such as the human microbiome project and TARA Oceans, have illuminated the complexities of microbial biomes. A robust bioinformatic pipeline and meticulous evaluation of their methodology have contributed to the success o...

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Autors principals:	Niranjana Rose Edwin, Amy Heather Fitzpatrick, Fiona Brennan, Florence Abram, Orla O’Sullivan
Format:	Artigo
Idioma:	Inglês
Publicat:	BMC 2024-03-01
Col·lecció:	Environmental Microbiome
Matèries:	Shotgun metagenomics Taxonomic classifier comparison Soil microbiome Genome taxonomy database Kraken2 Bracken
Accés en línia:	https://doi.org/10.1186/s40793-024-00561-w
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