SMART: spatial transcriptomics deconvolution using marker-gene-assisted topic model
Abstract While spatial transcriptomics offer valuable insights into gene expression patterns within the spatial context of tissue, many technologies do not have a single-cell resolution. Here, we present SMART, a marker gene-assisted deconvolution method that simultaneously infers the cell type-spec...
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| Автори: | , , |
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| Формат: | Artigo |
| Мова: | Inglês |
| Опубліковано: |
BMC
2024-12-01
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| Серія: | Genome Biology |
| Предмети: | |
| Онлайн доступ: | https://doi.org/10.1186/s13059-024-03441-1 |
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