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Taxonomy based performance metrics for evaluating taxonomic assignment methods

Abstract Background Metagenomics experiments often make inferences about microbial communities by sequencing 16S and 18S rRNA, and taxonomic assignment is a fundamental step in such studies. This paper addresses the weaknesses in two types of metrics commonly used by previous studies for measuring t...

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Auteurs principaux: Chung-Yen Chen, Sen-Lin Tang, Seng-Cho T. Chou
Format: Artigo
Langue:Inglês
Publié: BMC 2019-06-01
Collection:BMC Bioinformatics
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Accès en ligne:http://link.springer.com/article/10.1186/s12859-019-2896-0
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