Multi-context seeds enable fast and high-accuracy read mapping
Abstract A key step in sequence similarity search is to identify shared seeds between a query and a reference sequence. A well-known tradeoff is that longer seeds offer fast searches but reduce sensitivity in variable regions. We introduce multi-context seeds (MCS), which allow the storage of seeds...
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| Autors principals: | , , , |
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| Format: | Artigo |
| Idioma: | Inglês |
| Publicat: |
BMC
2026-02-01
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| Col·lecció: | Genome Biology |
| Matèries: | |
| Accés en línia: | https://doi.org/10.1186/s13059-026-04017-x |
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