sangerFlow, an Automated Bioinformatics Pipeline to Analyze Sanger Amplicon Sequencing Data for Pest and Pathogen Diagnosis

Polymerase chain reaction (PCR) amplicon sequencing allows for reliable identification of an organism by amplifying and analyzing a single conserved marker gene or DNA barcode. As this approach generally involves a single gene, it is an easier protocol to run compared with multilocus or whole-genome...

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Autors principals:	M. Asaduzzaman Prodhan, Matthew Power, Monica Kehoe
Format:	Artigo
Idioma:	Inglês
Publicat:	The American Phytopathological Society 2025-09-01
Col·lecció:	PhytoFrontiers
Matèries:	amplicon DNA molecular diagnostic Nextflow Sanger sequencing Singularity
Accés en línia:	https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-09-24-0104-SC
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