Hairpin loop to hairpin loop: a full-length assembly of the ASFV genome using Oxford Nanopore long-read sequencing

Short-read assembly of the African swine fever virus (ASFV) genome is challenging due to the presence of inverted terminal repeat (ITR) and hairpin loop sequences, which often cause ambiguity in contig reconstruction. In this study, we employed Oxford Nanopore long-read sequencing to assemble a full...

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Egile Nagusiak:	Poompat Phadphon, Chutima Sonthirod, Theeradej Thaweerattanasinp, Jeremy R. Shearman, Sonicha U-thoomporn, Janya Saenboonrueng, Asawin Wanitchang, Sithichoke Tangphatsornruang, Anan Jongkaewwattana, Wirulda Pootakham
Formatua:	Artigo
Hizkuntza:	Inglês
Argitaratua:	Frontiers Media S.A. 2025-08-01
Saila:	Frontiers in Microbiology
Gaiak:	hairpin loop MA-104 cells African swine fever virus ASFV adaptation
Sarrera elektronikoa:	https://www.frontiersin.org/articles/10.3389/fmicb.2025.1615977/full
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