Flankophile: a bioinformatic pipeline for prokaryotic genomic synteny analysis

ABSTRACT Analysis of flanking region sequences can be useful when comparing mobile prokaryotic sequences from different bacterial isolates or metagenomes. Here, we report a new bioinformatics tool, a pipeline called Flankophile, which can analyze flanking regions and sequence variants. The main feat...

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Détails bibliographiques

Auteurs principaux:	Alix Vincent Thorn, Frank M. Aarestrup, Patrick Munk
Format:	Artigo
Langue:	Inglês
Publié:	American Society for Microbiology 2024-01-01
Collection:	Microbiology Spectrum
Sujets:	bioinformatics antibiotics resistance veterinary microbiology software phylogenetic analysis epidemiology
Accès en ligne:	https://journals.asm.org/doi/10.1128/spectrum.02413-23
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