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An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella

Comparative genomics based on whole genome sequencing (WGS) is increasingly being applied to investigate questions within evolutionary and molecular biology, as well as questions concerning public health (e.g., pathogen outbreaks). Given the impact that conclusions derived from such analyses may hav...

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Principais autores: James B. Pettengill, Yan Luo, Steven Davis, Yi Chen, Narjol Gonzalez-Escalona, Andrea Ottesen, Hugh Rand, Marc W. Allard, Errol Strain
Format: Artigo
Sprog:Inglês
Udgivet: PeerJ Inc. 2014-10-01
Serier:PeerJ
Fag:
Salmonella
Outbreak
Congruence
Phylogenetics
Next generation sequencing
Single nucleotide polymorphism
Online adgang:https://peerj.com/articles/620.pdf
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